PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI28478.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | GRAS | ||||||||
Protein Properties | Length: 102aa MW: 11196.8 Da PI: 6.2355 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 93.5 | 3.4e-29 | 1 | 96 | 120 | 222 |
GRAS 120 sqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesv 218 +qGlQWp L++ LasRp+gpp +R+Tg+g s e+le+tg+rL++fA++lg+pfef + va+++ ++++++L+v++ Ea+aV++ h+l+d ++ MCI28478.1 1 MQGLQWPGLFHILASRPGGPPYVRLTGLGT----SMETLEATGKRLSDFASKLGLPFEFFP-VAEKVGNIDPDKLNVSKSEAVAVHWLQ--HSLYDVTG 92 69****************************....***************************.7************************99..88887777 PP GRAS 219 sles 222 s ++ MCI28478.1 93 SDTN 96 7766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 102 aa Download sequence |
MQGLQWPGLF HILASRPGGP PYVRLTGLGT SMETLEATGK RLSDFASKLG LPFEFFPVAE 60 KVGNIDPDKL NVSKSEAVAV HWLQHSLYDV TGSDTNTLWL LQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54220.1 | 9e-60 | GRAS family protein |