PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI28402.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family NF-YC
Protein Properties Length: 110aa    MW: 12549.2 Da    PI: 6.7929
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI28402.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC123.21.1e-3836110172
       NF-YC   1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrr 72 
                 ql++fwe+q   ie++td+knh+lPlarikki+kadedvkmisaeaPvl++kacelfi eltlrsw+h+eenkrr
  MCI28402.1  36 QLQAFWENQiqeIENVTDIKNHSLPLARIKKIMKADEDVKMISAEAPVLFAKACELFISELTLRSWNHTEENKRR 110
                 89******988899***********************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 110 aa     Download sequence    
MDHQGNNQNP QKGVVGSGGQ MPYGSNPYQS NPLQQQLQAF WENQIQEIEN VTDIKNHSLP  60
LARIKKIMKA DEDVKMISAE APVLFAKACE LFISELTLRS WNHTEENKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08970.32e-45NF-YC family protein