PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI28402.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | NF-YC | ||||||||
Protein Properties | Length: 110aa MW: 12549.2 Da PI: 6.7929 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 123.2 | 1.1e-38 | 36 | 110 | 1 | 72 |
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrr 72 ql++fwe+q ie++td+knh+lPlarikki+kadedvkmisaeaPvl++kacelfi eltlrsw+h+eenkrr MCI28402.1 36 QLQAFWENQiqeIENVTDIKNHSLPLARIKKIMKADEDVKMISAEAPVLFAKACELFISELTLRSWNHTEENKRR 110 89******988899***********************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 110 aa Download sequence |
MDHQGNNQNP QKGVVGSGGQ MPYGSNPYQS NPLQQQLQAF WENQIQEIEN VTDIKNHSLP 60 LARIKKIMKA DEDVKMISAE APVLFAKACE LFISELTLRS WNHTEENKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08970.3 | 2e-45 | NF-YC family protein |