PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | MCI28342.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
|
||||||||
Family | ZF-HD | ||||||||
Protein Properties | Length: 120aa MW: 13517.1 Da PI: 6.7652 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 97.5 | 1e-30 | 6 | 61 | 3 | 59 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 v+YkeClkNhAas+Gg+a+DGCgEfm+s ge+ t +alkC C+CHRnFHR+e e+ MCI28342.1 6 VVKYKECLKNHAASIGGNATDGCGEFMSS-GENDTLEALKCCVCNCHRNFHRKEIES 61 689*************************9.8888*******************9876 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 120 aa Download sequence |
MEKKIVVKYK ECLKNHAASI GGNATDGCGE FMSSGENDTL EALKCCVCNC HRNFHRKEIE 60 SDYSQHYAIS LIPDHNINAP FLAHLSPNNK SGSTSPSDQS YYEKDCIKDD ENRTEKMIKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G02540.1 | 1e-30 | ZF-HD family protein |