PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI28272.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family NAC
Protein Properties Length: 59aa    MW: 6824.34 Da    PI: 4.0091
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI28272.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM37.95.3e-121359148
         NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48
                lppGfrF Ptdeelvv+     ++  +++  +vi+++d+y ++Pw+L+
  MCI28272.1 13 LPPGFRFYPTDEELVVHXXXXXASLLPCHP-DVIPDLDLYPFDPWQLQ 59
                79***************9999999999998.99*************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 59 aa     Download sequence    
MGDHNNNNNN VNLPPGFRFY PTDEELVVHX XXXXASLLPC HPDVIPDLDL YPFDPWQLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64530.13e-21NAC family protein