PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI28017.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family C3H
Protein Properties Length: 46aa    MW: 4748.41 Da    PI: 7.5821
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI28017.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH19.32e-063151426
                --TTTTT-SS-SS CS
     zf-CCCH 14 tCkyGdrCkFaHg 26
                 C++G++C+F H 
  MCI28017.1  3 GCPFGESCHFLHH 15
                5***********6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 46 aa     Download sequence    
TSGCPFGESC HFLHHVPGGY NAAAQMMNLT PAAPPAPRNV APPPHV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06770.16e-14C3H family protein