PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI27811.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 85aa MW: 9944.71 Da PI: 10.6396 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 82.7 | 2.4e-26 | 34 | 82 | 2 | 50 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 +++n ++rqv fs Rr+ ++KKA+ELS+LCdaev vi+fsstgklye+s MCI27811.1 34 KVDNLIRRQVAFSERRKSLFKKAKELSILCDAEVGVIVFSSTGKLYEFS 82 67999*******************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 85 aa Download sequence |
LVFGVEEKKE LVKVEENKKK KKKRMGSRDI EIEKVDNLIR RQVAFSERRK SLFKKAKELS 60 ILCDAEVGVI VFSSTGKLYE FSRPR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 18 | 24 | KKKKKKR |
2 | 18 | 57 | KKKKKKRMGSRDIEIEKVDNLIRRQVAFSERRKSLFKKAK |
3 | 19 | 58 | KKKKKKRMGSRDIEIEKVDNLIRRQVAFSERRKSLFKKAK |
4 | 20 | 59 | KKKKKKRMGSRDIEIEKVDNLIRRQVAFSERRKSLFKKAK |
5 | 21 | 60 | KKKKKKRMGSRDIEIEKVDNLIRRQVAFSERRKSLFKKAK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G14210.1 | 4e-22 | MIKC_MADS family protein |