PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI27794.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | GRAS | ||||||||
Protein Properties | Length: 153aa MW: 17257.3 Da PI: 9.4463 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 144.6 | 9.7e-45 | 1 | 119 | 6 | 138 |
GRAS 6 lecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIle 104 ++cAeav++++l+ a+al++++ la ++ +m+++a+yf+e+La+r+++ + + s s++l++ f+e++P+lkf+h+taNqaIle MCI27794.1 1 MACAEAVEQNNLTVAEALVKQIGYLAVSQEGAMRKVATYFAEGLARRIYG----V-----FPQVS---ISDSLQI--HFYETCPYLKFAHFTANQAILE 85 68************************************************....2.....22222...3444444..4********************* PP GRAS 105 avegeervHiiDfdisqGlQWpaLlqaLasRpeg 138 a++g++rvH+iDf+i+qG+QW+aL+qaLa Rp+ MCI27794.1 86 AFQGKSRVHVIDFSINQGMQWAALMQALALRPGC 119 *******************************953 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 153 aa Download sequence |
MACAEAVEQN NLTVAEALVK QIGYLAVSQE GAMRKVATYF AEGLARRIYG VFPQVSISDS 60 LQIHFYETCP YLKFAHFTAN QAILEAFQGK SRVHVIDFSI NQGMQWAALM QALALRPGCS 120 KKKKNLLYVL VVHLLFVSPE LVHRRLITPI IFW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14920.1 | 3e-54 | GRAS family protein |