PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI27766.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | GeBP | ||||||||
Protein Properties | Length: 173aa MW: 18995.2 Da PI: 10.1561 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 83 | 4.2e-26 | 51 | 138 | 1 | 96 |
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki.W 96 k+f+r++seeDe+v+L+Glidf +ktgk+p ++i af++fvkks+++++s++q+ Kir LK+Kf+ sf+k+hd+++fel kki W MCI27766.1 51 KTFRRIFSEEDELVILKGLIDFISKTGKDPLKNIAAFHDFVKKSLHATASNQQIKRKIRGLKDKFESSD---------SFNKSHDKEAFELFKKIsW 138 579**************************************************************8543.........689**********999956 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 173 aa Download sequence |
KKRAVDDNNA NGNASKRSKG KETVSAAAGG SGEENDDMEE DVRLTGDDSK KTFRRIFSEE 60 DELVILKGLI DFISKTGKDP LKNIAAFHDF VKKSLHATAS NQQIKRKIRG LKDKFESSDS 120 FNKSHDKEAF ELFKKISWGN NGGNVAGEEN GKAVNVKSPK KDVNVKVKHI GSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61730.1 | 3e-20 | GeBP family protein |