PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI27713.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | SRS | ||||||||
Protein Properties | Length: 93aa MW: 9713.61 Da PI: 6.3275 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 68.2 | 2.8e-21 | 5 | 55 | 103 | 153 |
DUF702 103 sslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153 + lP +++++avfrc rv+++ +ge+e+aY ++v+i GhvfkG+Lyd+G++ MCI27713.1 5 EALPGHINAPAVFRCHRVTAIGNGEDEFAYLATVHICGHVFKGFLYDHGVD 55 569**********************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 93 aa Download sequence |
ASFKEALPGH INAPAVFRCH RVTAIGNGED EFAYLATVHI CGHVFKGFLY DHGVDGKNPM 60 PCVSELQLGS GXNGECSSAI GVTTNNAYPA SAS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12330.4 | 4e-23 | SRS family protein |