PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | MCI27684.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
|
||||||||
Family | DBB | ||||||||
Protein Properties | Length: 168aa MW: 18554.4 Da PI: 4.6219 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 22.2 | 3e-07 | 1 | 41 | 6 | 40 |
zf-B_box 6 CpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40 C+ +++ + l+C+ ++ lC +C e H+ Ht++ MCI27684.1 1 CDYCGHSTAVLYCRADSAKLCFSCDREVHSTnqlfskHTRS 41 ******99*********************668888889876 PP | |||||||
2 | zf-B_box | 26.1 | 1.7e-08 | 42 | 85 | 4 | 42 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 +C+ +++ ++++ C + ++ +C++C e H + H+++pl MCI27684.1 42 LICDSCDDSPATILCSTESSVFCQNCDWENH-NlslsspHERRPL 85 69*****************************.6688899988775 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 168 aa Download sequence |
CDYCGHSTAV LYCRADSAKL CFSCDREVHS TNQLFSKHTR SLICDSCDDS PATILCSTES 60 SVFCQNCDWE NHNLSLSSPH ERRPLEGFTG CPSVTELLSI LGLQDIGKKS LLLPXXXXXX 120 GYVGYEIEGL SDLFVWDAPS FVSLDDLIST SPSSHNYRAM EVPPLPKV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G47890.2 | 3e-59 | DBB family protein |