PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI27287.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | SRS | ||||||||
Protein Properties | Length: 103aa MW: 10983.4 Da PI: 6.4969 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 72.2 | 1.5e-22 | 12 | 64 | 102 | 154 |
DUF702 102 tsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 ++slP+ v+++avf+c rvs++ +ge+elaY ++v+i+GhvfkG+LydqG+++ MCI27287.1 12 KQSLPRYVRAPAVFKCHRVSAIGNGEDELAYLATVNISGHVFKGFLYDQGIDA 64 467***********************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 103 aa Download sequence |
MFGTGIADVS FKQSLPRYVR APAVFKCHRV SAIGNGEDEL AYLATVNISG HVFKGFLYDQ 60 GIDAKNETMP CVSELQLGSN GSGKSYKECS SAIEVPTSAY PAS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12330.4 | 2e-21 | SRS family protein |