PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI26722.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 146aa MW: 16293 Da PI: 8.9665 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 56.5 | 1.3e-17 | 13 | 141 | 1 | 113 |
GAGA_bind 1 mdddgsre..rnkg.yye...............paaslkenlglqlmssiaerdaki..rernlalsekkaavaerdmaflqrdkalaernkalverdn 79 mddd ++e r+k yy+ ++++l +++++ s++aer+a++ e ++a+sek++a+a+rd a+ qrd+ala+r++al+erdn MCI26722.1 13 MDDDHQYEngRHKVeYYRgahspwntdpqhqikEQNALV--MNKKIRSIMAERQAALleLELEAAISEKNEALAARDAALRQRDEALAQRDNALLERDN 109 899888888999998999********9766553224455..999************977677889********************************** PP GAGA_bind 80 kllalllvenslasalpvgvqvlsgtksidslqq 113 +l+al+ ++ + s+ p++ ++ +g+k ++++ + MCI26722.1 110 ALAALQSRSGA--SNFPFNGGIQRGSKRMHHSSN 141 ******97665..8899999*********99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 146 aa Download sequence |
TTASVAKSSG SKMDDDHQYE NGRHKVEYYR GAHSPWNTDP QHQIKEQNAL VMNKKIRSIM 60 AERQAALLEL ELEAAISEKN EALAARDAAL RQRDEALAQR DNALLERDNA LAALQSRSGA 120 SNFPFNGGIQ RGSKRMHHSS NHISNM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G21240.1 | 2e-23 | BBR-BPC family protein |