PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI26493.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | NF-YC | ||||||||
Protein Properties | Length: 143aa MW: 16784.1 Da PI: 6.0034 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 180.7 | 1.3e-56 | 36 | 140 | 1 | 102 |
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 ql++fw++q ie+++dfknh+lPlarikki+kadedv+misaeaP+l++kacelfilelt+rswlhaeenkrrtl+k+diaaa+trtdifdflvdiv MCI26493.1 36 QLQMFWSYQrqeIEHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIV 134 89*****998899************************************************************************************** PP NF-YC 97 prdelk 102 prde+k MCI26493.1 135 PRDEIK 140 ***975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 143 aa Download sequence |
MENNNSHNQQ QYPTPQPTAV TSAAPFQHLL QQQQQQLQMF WSYQRQEIEH VNDFKNHQLP 60 LARIKKIMKA DEDVRMISAE APILFAKACE LFILELTIRS WLHAEENKRR TLQKNDIAAA 120 ITRTDIFDFL VDIVPRDEIK EEG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 109 | 115 | RRTLQKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G63470.2 | 1e-72 | NF-YC family protein |