PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI26025.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | bHLH | ||||||||
Protein Properties | Length: 167aa MW: 18650.6 Da PI: 5.0516 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 21.9 | 3.1e-07 | 2 | 36 | 15 | 54 |
HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++N++f Lr ++P+ K++Ka+ L A+ YI++L MCI26025.1 2 KLNQRFYALRAVVPNV-----SKMDKASLLGDAISYINEL 36 89*************6.....5****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 167 aa Download sequence |
EKLNQRFYAL RAVVPNVSKM DKASLLGDAI SYINELKSKL QGLESSKGEL EKQLDTTKKE 60 LELASKNPNP IPLDEEIEKT SSKLIDLEID VKIXXXXXXX XXXXXXXXXX XXKLMAALKE 120 LDLEVNHASV SVVNDLMIQQ ASVNMGSRFY TKEQLSSALS SKIGDAQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17880.1 | 1e-53 | bHLH family protein |