PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI25727.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family C3H
Protein Properties Length: 114aa    MW: 12820.2 Da    PI: 7.8841
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI25727.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH283.7e-094972225
                -S---SGGGGTS--TTTTT-SS-S CS
     zf-CCCH  2 ktelCrffartGtCkyGdrCkFaH 25
                k++lC+ f+ + +C+yG++C+F H
  MCI25727.1 49 KMKLCKKFYNGEQCPYGEKCSFLH 72
                789*******66************ PP
Sequence ? help Back to Top
Protein Sequence    Length: 114 aa     Download sequence    
INDRTEQHSG FEQHSFKRAR MIGNNRSDVL PCPPPRVGNW DDDQKIIHKM KLCKKFYNGE  60
QCPYGEKCSF LHEDPAKFRA DSWKSRECSA ISIGTVGSPK SFGDGSDNLE GNSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19360.13e-23C3H family protein