PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI25476.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | HB-other | ||||||||
Protein Properties | Length: 127aa MW: 15045.2 Da PI: 10.2933 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 56.9 | 3.4e-18 | 21 | 79 | 3 | 57 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 k ++t+eq+e+Le+++ ++++ps +r++L ++ +++ +q+kvWFqNrR +ek+ MCI25476.1 21 KYVRYTAEQIEALEKVYVECPKPSSLRRQQLIRENpvlsNIEPKQIKVWFQNRRCREKQ 79 5679******************************9999*******************97 PP | |||||||
2 | bZIP_1 | 20.5 | 1e-06 | 73 | 118 | 18 | 63 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 18 rrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 rr+R++ ++e eL++ L a Nk L +e+++l+k+v++l +e+ MCI25476.1 73 RRCREKQRKESSELQTLNRRLAAMNKLLTEENDRLQKQVSQLVNEN 118 9****************************************98876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 127 aa Download sequence |
MAMAVAQRDN SIERHIDSSG KYVRYTAEQI EALEKVYVEC PKPSSLRRQQ LIRENPVLSN 60 IEPKQIKVWF QNRRCREKQR KESSELQTLN RRLAAMNKLL TEENDRLQKQ VSQLVNENGF 120 MRQQINT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60690.1 | 4e-65 | HD-ZIP family protein |