PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI25322.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | GRAS | ||||||||
Protein Properties | Length: 99aa MW: 11538 Da PI: 8.0406 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 103.8 | 2.4e-32 | 1 | 99 | 275 | 374 |
GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373 lpres++r++vEr++l+r+ivn++aceg++r+er e ++kWr+rl++aGF++ p+s+++++ +k l+r++ + y+ ++e g+l +gW+d++L+++SaW MCI25322.1 1 LPRESQDRVNVERQCLARDIVNIIACEGEDRIERYEVAGKWRARLKMAGFTSSPMSTNVEEAIKELIRQYCD-KYKXKQEMGALHFGWEDKNLIVASAW 98 699********************************************************************5.5************************* PP GRAS 374 r 374 + MCI25322.1 99 K 99 8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 99 aa Download sequence |
LPRESQDRVN VERQCLARDI VNIIACEGED RIERYEVAGK WRARLKMAGF TSSPMSTNVE 60 EAIKELIRQY CDKYKXKQEM GALHFGWEDK NLIVASAWK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21450.1 | 1e-48 | GRAS family protein |