PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI25196.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | bHLH | ||||||||
Protein Properties | Length: 108aa MW: 12696.7 Da PI: 7.1826 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 35.5 | 1.7e-11 | 74 | 102 | 3 | 34 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...T CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskap 34 ++h+++E+rRRdriN+ +++Lr+l+Pk+ + MCI25196.1 74 KSHSQAEKRRRDRINTQLANLRKLIPKS---D 102 79*************************5...2 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 108 aa Download sequence |
MENYNNDSSE WQQQQQQHKH WSQYSSDDHS HFPTQILPHN VSDSSSASFQ YSEFQSWPLP 60 IEESLEDRAV SASKSHSQAE KRRRDRINTQ LANLRKLIPK SDKGREVK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40200.1 | 1e-09 | bHLH family protein |