PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI24319.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | GRAS | ||||||||
Protein Properties | Length: 164aa MW: 18186.9 Da PI: 6.6757 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 146.5 | 2.6e-45 | 14 | 160 | 226 | 374 |
GRAS 226 evLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGF 324 +L+l+ +l+Pk+++ veq+++h ++sFl+rf+eal+yysalfd+l +l+ +s er++vE++llg ei+n++a g +r+ + + +e+W + l+++GF MCI24319.1 14 GTLRLLSQLRPKLITTVEQDLSH-AGSFLARFVEALHYYSALFDALGDGLGVDSVERHMVEQQLLGCEIRNIIAVGGPKRTGEVK-VERWGDELKRVGF 110 58*********************.899****************************************************998887.9************ PP GRAS 325 kpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 +p++l+ + a+qa+lll +++++gy++ ee+gsl lgWkd +L+ +SaW+ MCI24319.1 111 RPISLRGNPAAQASLLLGMFPWRGYTLVEENGSLKLGWKDLSLLIASAWQ 160 *************************************************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 164 aa Download sequence |
MHHCLYDITG SDLGTLRLLS QLRPKLITTV EQDLSHAGSF LARFVEALHY YSALFDALGD 60 GLGVDSVERH MVEQQLLGCE IRNIIAVGGP KRTGEVKVER WGDELKRVGF RPISLRGNPA 120 AQASLLLGMF PWRGYTLVEE NGSLKLGWKD LSLLIASAWQ PSDL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54220.1 | 2e-74 | GRAS family protein |