PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI23173.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | C2H2 | ||||||||
Protein Properties | Length: 118aa MW: 13851 Da PI: 10.3674 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 19.9 | 1.9e-06 | 6 | 28 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H MCI23173.1 6 FVCEICNKGFQRDQNLQLHRRGH 28 89*******************88 PP | |||||||
2 | zf-C2H2 | 16 | 3.4e-05 | 82 | 104 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ MCI23173.1 82 WKCDKCSKKYAVQSDWKAHTKTC 104 58*******************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 118 aa Download sequence |
MATNRFVCEI CNKGFQRDQN LQLHRRGHNL PWKLKQRSNK EPRKKVYICP EKTCVHHDAA 60 RALGDLTGIK KHFSRKHGEK KWKCDKCSKK YAVQSDWKAH TKTCGTREYK CDCGTLFS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 33 | 45 | KLKQRSNKEPRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66730.1 | 4e-70 | C2H2 family protein |