PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI22887.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | GRAS | ||||||||
Protein Properties | Length: 193aa MW: 21726.4 Da PI: 5.8302 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 201.6 | 4.7e-62 | 27 | 192 | 1 | 172 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 l++lLl+cA++v++ +le+a+a+L+++s laspdgd+mqR+aayfteALa r+++ +++l kal++++ +see+ ++klf+e++P+lk++++++N MCI22887.1 27 LIHLLLTCANHVADCNLENANATLEQISMLASPDGDTMQRIAAYFTEALADRILKAWPGLHKALNSTRMV--MVSEEILVQKLFFELFPFLKVAYILTN 123 689*************************************************************998886..69************************* PP GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeel 172 qaI+ea+ege+++HiiD+++ +++QW+aLlq L++Rpegpp+lRiT v++ +ke l ++++rL + Ae+l MCI22887.1 124 QAIVEAMEGEKMIHIIDLNAAEPAQWIALLQVLSTRPEGPPHLRITSVHP----KKEVLDKIAHRLIEEAERL 192 **************************************************....9***************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence |
MMSVPPSIGS PHSWLKELKS EERGLYLIHL LLTCANHVAD CNLENANATL EQISMLASPD 60 GDTMQRIAAY FTEALADRIL KAWPGLHKAL NSTRMVMVSE EILVQKLFFE LFPFLKVAYI 120 LTNQAIVEAM EGEKMIHIID LNAAEPAQWI ALLQVLSTRP EGPPHLRITS VHPKKEVLDK 180 IAHRLIEEAE RLD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50420.1 | 2e-99 | GRAS family protein |