PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI22680.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | NAC | ||||||||
Protein Properties | Length: 102aa MW: 11856.5 Da PI: 8.9826 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 112.9 | 3.3e-35 | 14 | 102 | 1 | 90 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 lppGfrF Ptdeel+v+yL++kv+g++++l ++i+e+d+yk++Pw Lp+k+ +ekewyfFs+rd+ky++g+r+nr++ sgyWkatg+dk MCI22680.1 14 LPPGFRFYPTDEELLVQYLCRKVAGHHFSL-QIIAEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGTRPNRVAGSGYWKATGTDK 102 79***************************9.89***************7777799********************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 102 aa Download sequence |
MGIQEKDPLS QLSLPPGFRF YPTDEELLVQ YLCRKVAGHH FSLQIIAEID LYKFDPWVLP 60 SKAIFGEKEW YFFSPRDRKY PNGTRPNRVA GSGYWKATGT DK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27410.2 | 2e-68 | NAC family protein |