PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI22670.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family C3H
Protein Properties Length: 123aa    MW: 13559.5 Da    PI: 4.2466
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI22670.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH36.11.1e-1187109426
                 ---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                 e C+f+++tG Ck+G +C+F+H+
  MCI22670.1  87 EDCSFYMKTGSCKFGFNCRFNHP 109
                 89********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    
EVEEEFVKGE EGFDGGSKGW DTNSWNENVN EKLGGGRDAD GYGYGGGYGD GYGYGDGYGY  60
GDADGVEDKE EKSGDGTHQF PLRPEAEDCS FYMKTGSCKF GFNCRFNHPI RRKNQVSSLL  120
FIF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63260.16e-16C3H family protein