PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI21456.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | NF-YC | ||||||||
Protein Properties | Length: 203aa MW: 22242 Da PI: 9.7498 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 36.4 | 1.1e-11 | 167 | 203 | 1 | 34 |
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkade 34 ql++fw++q ++k++dfk+h lPlarikki+kade MCI21456.1 167 QLQAFWANQyqeVKKVSDFKKHCLPLARIKKIMKADE 203 89******98788899*******************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence |
RGHNQNPPTG SVGSADRWPF EFINGEPLSV VRSVGGMQAT GQPAGAQLGQ QQQHNQNPFV 60 GSINNWPFGY MAFQPNHIMT GAPGPVVTSL GGMQSTGQPA GTQLGQHQLA YQQQLQQQLQ 120 GFWAYQMTGX PGSAXTSVXG MQSTXQLVGA QLGQHQLAYQ HIQQQQQLQA FWANQYQEVK 180 KVSDFKKHCL PLARIKKIMK ADE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G54830.3 | 2e-08 | NF-YC family protein |