PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | MCI21345.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
|
||||||||
Family | HB-other | ||||||||
Protein Properties | Length: 72aa MW: 8159.3 Da PI: 8.7391 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 31.5 | 3.1e-10 | 26 | 72 | 3 | 45 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVk 45 k ++t+eq+e+Le++++++++ps +r++L +++ +++ +q+k MCI21345.1 26 KYVRYTSEQVEALERVYAECPKPSSMRRQQLIRECpilsNIEPKQIK 72 5679********************************9999**99997 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 72 aa Download sequence |
MAMAVAHHRE SSSSGGSIDK HLDSGKYVRY TSEQVEALER VYAECPKPSS MRRQQLIREC 60 PILSNIEPKQ IK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G60690.1 | 6e-34 | HD-ZIP family protein |