PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI20822.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | GRAS | ||||||||
Protein Properties | Length: 163aa MW: 18996.7 Da PI: 8.2179 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 190.5 | 1.1e-58 | 2 | 161 | 214 | 374 |
GRAS 214 ldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetl 312 +desvs+e++rd++L+lvkslsPkvv++veqe+++n+++F++rf+e+++yy+a+f+s+++ ++++++ri+ E+ +++r+ivn++aceg er+erhe + MCI20822.1 2 PDESVSIENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFHRFVETMDYYTAMFESIDVACAKDDKKRISTEQNCVARDIVNMIACEGVERVERHEVF 100 799************************************************************************************************ PP GRAS 313 ekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 +kWr+r+ +aGF++ +ls++++ +++ ll+ ++++ yr+e+++g+++lgW++r++ + SaWr MCI20822.1 101 GKWRMRFAMAGFRQCSLSSSVMHSVQNLLKDYNQN-YRLEHRDGAIYLGWMKRAMATSSAWR 161 *********************************66.*************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 163 aa Download sequence |
MPDESVSIEN HRDRLLRLVK SLSPKVVTLV EQESNTNTSP FFHRFVETMD YYTAMFESID 60 VACAKDDKKR ISTEQNCVAR DIVNMIACEG VERVERHEVF GKWRMRFAMA GFRQCSLSSS 120 VMHSVQNLLK DYNQNYRLEH RDGAIYLGWM KRAMATSSAW RCN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G48150.1 | 2e-79 | GRAS family protein |