PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI20570.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | MYB_related | ||||||||
Protein Properties | Length: 82aa MW: 9229.98 Da PI: 3.8865 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 27 | 1.1e-08 | 8 | 55 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 g+W++e+ + + +a+ + ++ +W+ +a+ +g g+t++++ ++ MCI20570.1 8 GSWSAEDNKAFERAIVDFDKDtpdRWSNVAQVVGGGKTPEDVERHYEL 55 89*******************************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 82 aa Download sequence |
MASISATGSW SAEDNKAFER AIVDFDKDTP DRWSNVAQVV GGGKTPEDVE RHYELLLRDI 60 NLVESDQVPL PNYNDVESFD EE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G39250.1 | 4e-28 | MYB_related family protein |