PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | MCI20371.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 182aa MW: 20689.7 Da PI: 4.2117 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 35.1 | 2.6e-11 | 2 | 31 | 30 | 59 |
TT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 30 agCpvkkkversaedpkvveitYegeHnhe 59 +gC++kk+vers++d ++++itY+++Hnh+ MCI20371.1 2 KGCSAKKQVERSSTDASMLIITYTSKHNHP 31 68***************************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 182 aa Download sequence |
SKGCSAKKQV ERSSTDASML IITYTSKHNH PDPTAVSATN SAQQPKESET ETIKDLPITS 60 KEEDQEHIVE EMINNKSIVT STDQVTNEEN FHYLQSPIHC SEEIIIDQED PFKLNIEKNX 120 IDKIDILLEE EPLCYAQLKN LTESKSEELD FFDELEELPM SSSILHFTRS IFSDERIPVA 180 PS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G34830.1 | 5e-13 | WRKY family protein |