PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI19768.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | GRAS | ||||||||
Protein Properties | Length: 212aa MW: 23936.5 Da PI: 7.1148 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 236.9 | 8.6e-73 | 1 | 211 | 133 | 344 |
GRAS 133 asRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsles..erdevLk 229 a Rp+gpp lR+Tg+g+p+++++++l+e+g rLa++A++++v+f f+ ++a rled+++++L+v+++Ea+aVn+++qlhrll ++ + ++ ++++vL MCI19768.1 1 ALRPGGPPFLRLTGIGPPSHDNRDNLREIGLRLAELARSVNVRFAFRGVAAWRLEDVKPWMLQVSSKEAVAVNSIMQLHRLLGSEPDPNNpsAIETVLG 99 68**********************************************9888******************************888776666699***** PP GRAS 230 lvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvp 328 ++sl+Pk+++vveqea+hn+ F++rf+eal+yys++fdslea e ++ + +++l+rei+nvv+ceg +r+erhe l kWrerl++ GF+p++ MCI19768.1 100 WIRSLNPKIMTVVEQEANHNEDGFMDRFTEALHYYSTVFDSLEAC---PVEPDKAMAEFYLQREICNVVCCEGPARVERHEPLVKWRERLGKTGFRPLH 195 ******************************************999...567788889999*************************************** PP GRAS 329 lsekaakqaklllrkv 344 l+++a kqa++ll + MCI19768.1 196 LGSNAFKQASMLLTLF 211 *************876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
ALRPGGPPFL RLTGIGPPSH DNRDNLREIG LRLAELARSV NVRFAFRGVA AWRLEDVKPW 60 MLQVSSKEAV AVNSIMQLHR LLGSEPDPNN PSAIETVLGW IRSLNPKIMT VVEQEANHNE 120 DGFMDRFTEA LHYYSTVFDS LEACPVEPDK AMAEFYLQRE ICNVVCCEGP ARVERHEPLV 180 KWRERLGKTG FRPLHLGSNA FKQASMLLTL FS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14920.1 | 2e-84 | GRAS family protein |