PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI19367.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | NF-YA | ||||||||
Protein Properties | Length: 81aa MW: 9661.24 Da PI: 11.5697 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 102.9 | 2.9e-32 | 14 | 70 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQy++Il+RRq+Rak+e ekk+ +k rkpylheSR+ hAlrR+Rg+gGrF MCI19367.1 14 EEPVYVNAKQYHGILRRRQSRAKAELEKKV-IKVRKPYLHESRRLHALRRARGNGGRF 70 69****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 81 aa Download sequence |
MHHARVLLPL EMEEEPVYVN AKQYHGILRR RQSRAKAELE KKVIKVRKPY LHESRRLHAL 60 RRARGNGGRF LNTKKLEHNN S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30500.1 | 8e-29 | NF-YA family protein |