PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI19329.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | GRAS | ||||||||
Protein Properties | Length: 198aa MW: 21881.2 Da PI: 4.3049 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 28.1 | 2.4e-09 | 142 | 197 | 1 | 55 |
GRAS 1 lvelLlecAeavssgdlelaqalLar.lselaspdgdpmqRlaayfteALaarlar 55 l+e+Ll cA+avs+gd a+ + + l +++s +gdp+qRl ay++e+L+arl + MCI19329.1 142 LKEVLLLCAQAVSDGDIPTARGWMDNvLVKMVSVAGDPIQRLSAYLLEGLRARLES 197 5789******************998625677**********************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence |
MQRQFYHQSD LSFGTMKEEC FPLESYPEIA AFIDCDSPSY ASVSSSKSPF SPQDSQSQSC 60 HSDHQQSSDN TYGSPISGMS SVDDGHDLKH KLRELENSLL GSDDFDIVDS YGNCMETRLH 120 GASPSAKYDW DLIAENIQKL DLKEVLLLCA QAVSDGDIPT ARGWMDNVLV KMVSVAGDPI 180 QRLSAYLLEG LRARLESS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17230.1 | 9e-28 | GRAS family protein |