PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI18486.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | SBP | ||||||||
Protein Properties | Length: 119aa MW: 13726.2 Da PI: 8.1289 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 44 | 6e-14 | 1 | 30 | 49 | 78 |
EEETTT--SS--S-STTTT-------S--- CS SBP 49 fhelsefDeekrsCrrrLakhnerrrkkqa 78 fh +sefD++krsCrrrLa+hnerrrk+++ MCI18486.1 1 FHVVSEFDDSKRSCRRRLAGHNERRRKSSH 30 9**************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 119 aa Download sequence |
FHVVSEFDDS KRSCRRRLAG HNERRRKSSH DSVARNSSQG GCALSLLSSR TDSWLSPADL 60 SVRCSAALSE LIAENRAAIM ARQYVSDRDW HLHHHAMEDY REIQPESNYF PQQMFPQTH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15270.1 | 6e-13 | SBP family protein |