PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI18327.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | NF-X1 | ||||||||
Protein Properties | Length: 159aa MW: 17821.9 Da PI: 9.2561 | ||||||||
Description | NF-X1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-NF-X1 | 24 | 8.4e-08 | 61 | 79 | 1 | 19 |
zf-NF-X1 1 CGkHkCqklCHeGpCppCp 19 CG+H+C+ CH GpC+pC+ MCI18327.1 61 CGRHRCENACHVGPCDPCQ 79 ******************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence |
RKDQLCPHAC VLQCHPGPCP PCKAFAPPRL CPCGKKRIAT RCSDRQSDLT CGQRCDKLLN 60 CGRHRCENAC HVGPCDPCQV LINASCFCSK MMQAAVVNVN FYQAGLRHAV VEKQSWRTNG 120 RVVWIRYLHA HKYVASSFLA GYMLVRSHAM LGNVHRVRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10170.1 | 2e-48 | NF-X1 family protein |