PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI18291.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

NF-YC

Protein Properties

Length: 220aa MW: 25260.8 Da PI: 7.7805

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI18291.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	144.3	2.8e-45	60	161	2	100
NF-YC 2 lksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivp 97 l +fw+kq i ++ dfk h++Pl rikki+kade+v++isaeaP+l++kace+fi+elt+rsw +a+ n+rrtl+k dia+a+++td+fdflvdivp MCI18291.1 60 LATFWAKQnleIHETMDFKTHRIPLLRIKKIMKADEQVNKISAEAPILFAKACEMFIMELTIRSWANADFNRRRTLHKGDIASAISNTDVFDFLVDIVP 158 789**9998999*********************************************************************************** PP NF-YC 98 rde 100 +++ MCI18291.1 159 KED 161 *97 PP

Sequence ? help Back to Top
Protein Sequence Length: 220 aa Download sequence
QPREQENHAP TGTQANQIMQ LSHPLIHSAG ASTFSSYLSR DPFQHFSHKY FNQQHLQTKL 60 ATFWAKQNLE IHETMDFKTH RIPLLRIKKI MKADEQVNKI SAEAPILFAK ACEMFIMELT 120 IRSWANADFN RRRTLHKGDI ASAISNTDVF DFLVDIVPKE DTMEHDIFKD IPRSECVPLR 180 NVNVPYYVPV PLQPQYVPGQ PQYVPMQPQY AAGPSYGPQG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63470.2	9e-47	NF-YC family protein