PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI18083.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | WRKY | ||||||||
Protein Properties | Length: 133aa MW: 14146.4 Da PI: 4.4452 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 43.3 | 7.2e-14 | 1 | 38 | 23 | 59 |
EEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 23 sYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +YYrC+s+ gCp++k+vers+ dp+ + +tY +Hnh+ MCI18083.1 1 GYYRCSSSkGCPARKQVERSRVDPTNLLVTYAYDHNHS 38 5*****998****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 133 aa Download sequence |
GYYRCSSSKG CPARKQVERS RVDPTNLLVT YAYDHNHSLP LPKSHSSSSA VTATATTTVD 60 SPGDDSSGEC TAATPPQPEN PAVFASHPDF DFAGEHHAVF GWFDDMASTG VLVSPICGGV 120 EDVTLTIREE DES |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58710.1 | 4e-17 | WRKY family protein |