PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI17974.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | GRAS | ||||||||
Protein Properties | Length: 208aa MW: 23827.9 Da PI: 7.2331 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 54.8 | 1.9e-17 | 119 | 208 | 3 | 98 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 ++L++ Ae +++g+ +aq +Larl+++ sp g+p++R+ +y++eAL+ l++++++ ++ s+ + + ++ a+k fse+sP+l+f+++t+ MCI17974.1 119 DQLYKTAELIEAGNPVQAQGILARLNHQLSPIGKPFERASFYVKEALQLMLHSNGNN------LNAFSPISFIFKIGAYKSFSEISPVLQFANFTC 208 689**************************************************4444......4444445589*********************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence |
MNHNQVQFSE NPSFFVPLPY PQVQEQQVFS QNQLKRPLFD XXXXXXXXXX XXXXXXXXXX 60 XXXXXXXXXX XXXXXXHHHL QQHEQQQQSS VVPFTKQQKV SSTIAGDDAS NQLQQSIFDQ 120 LYKTAELIEA GNPVQAQGIL ARLNHQLSPI GKPFERASFY VKEALQLMLH SNGNNLNAFS 180 PISFIFKIGA YKSFSEISPV LQFANFTC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00150.1 | 1e-28 | GRAS family protein |