PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI17901.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | GRAS | ||||||||
Protein Properties | Length: 221aa MW: 24056.2 Da PI: 10.1086 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 94.2 | 2e-29 | 67 | 218 | 2 | 150 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100 +elL cA a++ g+l+++q+lL l+ AL ++l++s+s++ + + + + + ++l f+evsP++ f + +aN MCI17901.1 67 EELLNPCAAAITGGNLNRVQHLLYVLHXXXXXXXXXXXXXXXXXXXALTHHLSSSSSSTTSGTITFACT--EPRFFQKSLLKFYEVSPWFSFPNNIANA 163 6899**************************************************666665544444443..24555556666***************** PP GRAS 101 aIleavege....ervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgsp 150 Il+ +++e + +Hi+D+++s+G+QWp++l+aL+ Rp ++pp +R+T+v ++ MCI17901.1 164 SILQVLAEEpnnsRSLHILDIGVSHGVQWPTFLEALSRRPgGPPPLVRLTVVTAS 218 ******9998888999************************55566*******985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence |
DESGLKKQSQ NQKNKRIKSR PTNEADNGDA AIEGPVVRKP GGNKKGSAKA NGNNSSNGNN 60 KDGRWAEELL NPCAAAITGG NLNRVQHLLY VLHXXXXXXX XXXXXXXXXX XXALTHHLSS 120 SSSSTTSGTI TFACTEPRFF QKSLLKFYEV SPWFSFPNNI ANASILQVLA EEPNNSRSLH 180 ILDIGVSHGV QWPTFLEALS RRPGGPPPLV RLTVVTASST E |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13840.1 | 3e-41 | GRAS family protein |