PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI17161.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | NF-YA | ||||||||
Protein Properties | Length: 181aa MW: 20582 Da PI: 9.7002 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 101.3 | 9.4e-32 | 29 | 85 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVN+KQy++Il+RRq Rakle+++kl +k rkpylheSRh hAl+R+Rg gGrF MCI17161.1 29 EEPIYVNSKQYHAILRRRQCRAKLEAHNKL-IKDRKPYLHESRHVHALKRARGAGGRF 85 69****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 181 aa Download sequence |
MSSNSDQLLH GQLMETAPVR IPLPSDMTEE PIYVNSKQYH AILRRRQCRA KLEAHNKLIK 60 DRKPYLHESR HVHALKRARG AGGRFLNAKK LKESKQASPN HGQNVSTSYT CLNLNGNMSE 120 SKIHDQVENY RDGASASDVT YASNKNEMFQ QQQELEFRLC SYPSSQTGRN MQDYTADKSV 180 G |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72830.1 | 3e-43 | NF-YA family protein |