PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI17077.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family B3
Protein Properties Length: 130aa    MW: 14722.5 Da    PI: 4.6754
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI17077.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B337.15.8e-1215793199
                .--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3 31 eesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                  +k++ led+ g +  v++  +  +g++ +++GW  F k++gL+ gD+vvF  ++  + ++ vk++++
  MCI17077.1 15 LIDKKINLEDSAGGRTAVTI--SEVDGSFAFKEGWDVFSKEHGLEIGDIVVFNCIN--KLNFDVKIYDE 79
                45789***************..*******************************776..45558888775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    
MQYLPPKLNH IMSNLIDKKI NLEDSAGGRT AVTISEVDGS FAFKEGWDVF SKEHGLEIGD  60
IVVFNCINKL NFDVKIYDES VCERLDFSKK RNGRKRDRSG HIYQNDDLAV FNEDPMLEEV  120
LGTGDTSYAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18960.16e-10B3 family protein