PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI16933.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | NF-YA | ||||||||
Protein Properties | Length: 56aa MW: 6363.58 Da PI: 11.6263 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 56.2 | 1.1e-17 | 22 | 56 | 1 | 36 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrk 36 d p+YVNaKQy++Il+RRq+Rakle+++kl +ksrk MCI16933.1 22 DGPIYVNAKQYHGILRRRQSRAKLEAQNKL-IKSRK 56 57****************************.99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 56 aa Download sequence |
MMPQMMGLAS ARVALPLDLA QDGPIYVNAK QYHGILRRRQ SRAKLEAQNK LIKSRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G54160.1 | 3e-20 | NF-YA family protein |