PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI16532.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | MYB_related | ||||||||
Protein Properties | Length: 120aa MW: 13643.1 Da PI: 5.0065 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 32.5 | 2e-10 | 8 | 52 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 +WT+eE +l+ +a + + ++ +W+++a++++ g+t ++ + MCI16532.1 8 KWTPEENKLFENALAVHDKDtpdRWHRVAEMIP-GKTVGDVMKQYK 52 8********************************.***999988775 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 120 aa Download sequence |
MEDNNTTKWT PEENKLFENA LAVHDKDTPD RWHRVAEMIP GKTVGDVMKQ YKELEDDVCN 60 IEAGLIPVPG YNTPTSPFTL DWVNSSGYDG FKGSGKRSPL ARATEHERKK GVPWTEEEHK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38090.1 | 7e-53 | MYB family protein |