PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI15662.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | MYB_related | ||||||||
Protein Properties | Length: 166aa MW: 18375.7 Da PI: 7.5586 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.8 | 8.1e-16 | 5 | 43 | 7 | 47 |
HHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 7 eEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 eEd +v a++ +G++ W++Iar ++ gRt++ +k++w++ MCI15662.1 5 EEDRTIVAAHAIHGNK-WAAIARLLP-GRTDNAIKNHWNST 43 9***************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 166 aa Download sequence |
MNCYEEDRTI VAAHAIHGNK WAAIARLLPG RTDNAIKNHW NSTLRRRGID QIRLESGIMV 60 EAKASSEETL SCGDVNSLKS SEGRDVSSME IVADKYEGNA RTDAQLYHEV RDPPTLFKPV 120 ARVSAFNVYN TFNGSQPSTS VPRPVPMQGP ILHPPKSDAE ICKMLN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G09230.1 | 4e-35 | MYB family protein |