PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI15645.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | TCP | ||||||||
Protein Properties | Length: 109aa MW: 12267.8 Da PI: 10.3728 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 114.2 | 1.7e-35 | 21 | 103 | 2 | 80 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.......ssssasec.eaessss 80 +gkkdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak +i++l+++ + +++ +++++++ MCI15645.1 21 TGKKDRHSKVYTSKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKAVDWLIKKAKSSIDKLAKLppwhpigE----NQTlKPQEEQN 103 79**************************************************************54432220....23322222222 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 109 aa Download sequence |
MRSTTGGEIV QVEGGHIVRS TGKKDRHSKV YTSKGPRDRR VRLSAHTAIE FYDVQDRLGY 60 DRPSKAVDWL IKKAKSSIDK LAKLPPWHPI GENQTLKPQE EQNASADTT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15030.2 | 7e-50 | TCP family protein |