PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | MCI15438.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 106aa MW: 11890.5 Da PI: 10.0621 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 90.7 | 2.6e-28 | 17 | 93 | 52 | 128 |
NAM 52 kaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++++w+fFs+ ++++a+g r+nr+t+ gyWkatg+ v+s++++++g+kkt+vfykg+ap+g+kt+W m+eyr+ MCI15438.1 17 REDKEQWFFFSPGQEREARGGRPNRTTACGYWKATGSPGYVYSSDNKVIGVKKTMVFYKGKAPSGKKTKWKMNEYRA 93 45678**********************************************************************96 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 106 aa Download sequence |
MILLQCVDAA LAGELCREDK EQWFFFSPGQ EREARGGRPN RTTACGYWKA TGSPGYVYSS 60 DNKVIGVKKT MVFYKGKAPS GKKTKWKMNE YRAIQVSNQS NTATPQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G44350.1 | 2e-47 | NAC family protein |