PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI15391.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | LBD | ||||||||
Protein Properties | Length: 95aa MW: 10608.8 Da PI: 6.9509 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 41.4 | 4.1e-13 | 1 | 40 | 61 | 100 |
DUF260 61 lvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +vyeA+ar+rdPvyG+vg i++lqqq++ l+++la++++e MCI15391.1 1 MVYEANARVRDPVYGCVGAISSLQQQVDVLRSQLAQAQAE 40 69*********************************99976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 95 aa Download sequence |
MVYEANARVR DPVYGCVGAI SSLQQQVDVL RSQLAQAQAE VVHMKMHQFS SPNQHQPSYF 60 PTPTASNSSP PSENVYQSSR LVSSHINIDQ SLWSY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G16530.1 | 3e-18 | LBD family protein |