PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI15210.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | TCP | ||||||||
Protein Properties | Length: 200aa MW: 21870.3 Da PI: 7.5824 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 135 | 6.7e-42 | 62 | 183 | 1 | 115 |
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg......kaak 92 +a+k+ +++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s++ + ++ MCI15210.1 62 PAPKRASTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSTMSAPshyfraDDSR 160 589*******************************************************************99987778888888666666666664444 PP TCP 93 saakskksqksaasalnlakesr 115 +++ ++++s ++ ln+++ ++ MCI15210.1 161 RNNNMMENPSSLSAILNFNNVQN 183 44444555555555666666555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
NIMELEGDHQ NNGIRSRPNF PLQLLEKKDN NILDVSEEQQ PCSTTANDGS GTIITSDNQK 60 KPAPKRASTK DRHTKVDGRG RRIRMPAACA ARVFQLTREL GHKSDGETIE WLLQQAEPAV 120 IAATGTGTIP ANFTSLNISL RSSGSTMSAP SHYFRADDSR RNNNMMENPS SLSAILNFNN 180 VQNAILQAKQ ELPEENASGG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69690.1 | 9e-54 | TCP family protein |