PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI15105.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | FAR1 | ||||||||
Protein Properties | Length: 236aa MW: 27451 Da PI: 7.6038 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 44.3 | 6e-14 | 1 | 60 | 33 | 90 |
FAR1 33 fvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 fvC ++g+re++ + ++++r++++etr gC+ak++v+ + +++w++t + +HnH+l MCI15105.1 1 FVCHRQGFREDRGLTiENRKRERKPETRSGCEAKFRVHIDIlSQRWQITVFTDQHNHDLL 60 9***********999778889999***************999***************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
FVCHRQGFRE DRGLTIENRK RERKPETRSG CEAKFRVHID ILSQRWQITV FTDQHNHDLL 60 DEKYCGMLPA HRRMKESDTV QMNDMLKGGI GPSQFYASMA NQAGGYENIG FRRKDIYNQI 120 GKQRRLKHCD GKNALHYLRG LASDDPMMFY RHTVDGEGRL EHLFWCDGIS QMDYQVYGDV 180 LAFDATYGRN KYHCPLVVFS GVNNHNNNVI FAGAIVANEK EETYVWVLEQ FLEAMS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 6e-39 | FAR1 family protein |