PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI14106.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | GRAS | ||||||||
Protein Properties | Length: 222aa MW: 24645.9 Da PI: 4.8021 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 165 | 6.1e-51 | 79 | 222 | 3 | 146 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101 lLl+cAe+v+ ++l+ a+ lL ++ el+sp g++ +R+ ayf++AL+ar+++s+ + y+ l++++ + ++s++ ++a++ ++ vsP++kfsh+taNqa MCI14106.1 79 GLLLQCAECVAMDNLBFANXLLPEITELSSPFGTSPERVGAYFAQALQARVVSSCLGSYSPLTAKSVTLTQSQRIFNAFQSYNSVSPLVKFSHFTANQA 177 58******************************************************************99***************************** PP GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTg 146 I +av+ge+r+HiiD+di+qGlQWp L++ LasR+++ s+RiTg MCI14106.1 178 IFQAVDGEDRIHIIDLDIMQGLQWPGLFHILASRSKKIRSVRITG 222 ********************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MLQSLVPRPP LTSKPNNNMN AKRAEREHDD DDSTLQEQPS FKRPNYSAEN TAVEAEEHDQ 60 EQAFEPENEG ESTGLKLLGL LLQCAECVAM DNLBFANXLL PEITELSSPF GTSPERVGAY 120 FAQALQARVV SSCLGSYSPL TAKSVTLTQS QRIFNAFQSY NSVSPLVKFS HFTANQAIFQ 180 AVDGEDRIHI IDLDIMQGLQ WPGLFHILAS RSKKIRSVRI TG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G41920.1 | 1e-69 | GRAS family protein |