PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI13902.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | GRAS | ||||||||
Protein Properties | Length: 57aa MW: 6262.16 Da PI: 4.9002 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 32.7 | 9.9e-11 | 1 | 54 | 319 | 373 |
GRAS 319 leeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373 +++a F+ + ++e+ + ++k++l +++ g+ +++e++++vl+Wk++++v++SaW MCI13902.1 1 MRNANFQGIGFGEECVGEVKAMLDEHA-AGWGLKKEDECIVLTWKGHNVVFASAW 54 899************************.99************************* PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 57 aa Download sequence |
MRNANFQGIG FGEECVGEVK AMLDEHAAGW GLKKEDECIV LTWKGHNVVF ASAWLPA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49950.1 | 3e-22 | GRAS family protein |