PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI13792.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

NF-YB

Protein Properties

Length: 119aa MW: 13712.4 Da PI: 7.3439

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI13792.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	172.3	5.1e-54	16	111	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 +eqdr+lPianv+rimk++lP nakisk+aket+qecvsef+sfvt+easdkc++ekrkt+ngdd++wa+++lGf+dy eplk yl kyrel+ e+ MCI13792.1 16 KEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFVSFVTGEASDKCHKEKRKTVNGDDVCWAMTNLGFDDYSEPLKRYLYKYRELDVER 111 89*****************************************************************************************99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 119 aa Download sequence
NNNNNFTSPQ DHEVIKEQDR LLPIANVGRI MKQILPPNAK ISKEAKETMQ ECVSEFVSFV 60 TGEASDKCHK EKRKTVNGDD VCWAMTNLGF DDYSEPLKRY LYKYRELDVE RGNQSKGNK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47810.1	1e-60	NF-YB family protein